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要在CUDA中实现PBiCGSTAB(预处理双共轭梯度稳定法)稀疏矩阵迭代算法,首先需要理解PBiCGSTAB算法的基本步骤,并将其与CUDA的并行计算能力结合。以下是一个简单的示例代码,展示了如何在CUDA中实现PBiCGSTAB算法。
1. PBiCGSTAB算法概述
PBiCGSTAB是一种用于求解大型稀疏线性方程组的迭代算法。其主要步骤包括:
- 初始化
- 预处理
- 迭代求解
- 收敛判断
2. CUDA实现
在CUDA中,稀疏矩阵通常使用CSR(Compressed Sparse Row)格式存储。我们需要在CUDA中实现矩阵向量乘法、向量加减法等基本操作。
3. 示例代码
#include <iostream>
#include <cuda_runtime.h>
#include <cusparse.h>// 定义矩阵大小
const int N = 1000;// CUDA核函数:矩阵向量乘法 (CSR格式)
__global__ void csrMatVecMult(int n, const double *values, const int *rowPtr, const int *colInd, const double *x, double *y) {int row = blockIdx.x * blockDim.x + threadIdx.x;if (row < n) {double sum = 0.0;int row_start = rowPtr[row];int row_end = rowPtr[row + 1];for (int j = row_start; j < row_end; j++) {sum += values[j] * x[colInd[j]];}y[row] = sum;}
}// CUDA核函数:向量加法
__global__ void vectorAdd(int n, const double *a, const double *b, double *c) {int idx = blockIdx.x * blockDim.x + threadIdx.x;if (idx < n) {c[idx] = a[idx] + b[idx];}
}// CUDA核函数:向量减法
__global__ void vectorSub(int n, const double *a, const double *b, double *c) {int idx = blockIdx.x * blockDim.x + threadIdx.x;if (idx < n) {c[idx] = a[idx] - b[idx];}
}// CUDA核函数:向量点积
__global__ void dotProduct(int n, const double *a, const double *b, double *result) {__shared__ double cache[256];int tid = threadIdx.x + blockIdx.x * blockDim.x;int cacheIndex = threadIdx.x;double temp = 0.0;while (tid < n) {temp += a[tid] * b[tid];tid += blockDim.x * gridDim.x;}cache[cacheIndex] = temp;__syncthreads();// 归约int i = blockDim.x / 2;while (i != 0) {if (cacheIndex < i) {cache[cacheIndex] += cache[cacheIndex + i];}__syncthreads();i /= 2;}if (cacheIndex == 0) {result[blockIdx.x] = cache[0];}
}// PBiCGSTAB算法
void PBiCGSTAB(int n, const double *values, const int *rowPtr, const int *colInd, const double *b, double *x, double tol, int max_iter) {double *r, *r0, *p, *v, *s, *t;double *d_r, *d_r0, *d_p, *d_v, *d_s, *d_t, *d_x, *d_b, *d_values;int *d_rowPtr, *d_colInd;// 分配主机内存r = (double *)malloc(n * sizeof(double));r0 = (double *)malloc(n * sizeof(double));p = (double *)malloc(n * sizeof(double));v = (double *)malloc(n * sizeof(double));s = (double *)malloc(n * sizeof(double));t = (double *)malloc(n * sizeof(double));// 分配设备内存cudaMalloc((void **)&d_r, n * sizeof(double));cudaMalloc((void **)&d_r0, n * sizeof(double));cudaMalloc((void **)&d_p, n * sizeof(double));cudaMalloc((void **)&d_v, n * sizeof(double));cudaMalloc((void **)&d_s, n * sizeof(double));cudaMalloc((void **)&d_t, n * sizeof(double));cudaMalloc((void **)&d_x, n * sizeof(double));cudaMalloc((void **)&d_b, n * sizeof(double));cudaMalloc((void **)&d_values, (rowPtr[n]) * sizeof(double));cudaMalloc((void **)&d_rowPtr, (n + 1) * sizeof(int));cudaMalloc((void **)&d_colInd, (rowPtr[n]) * sizeof(int));// 拷贝数据到设备cudaMemcpy(d_x, x, n * sizeof(double), cudaMemcpyHostToDevice);cudaMemcpy(d_b, b, n * sizeof(double), cudaMemcpyHostToDevice);cudaMemcpy(d_values, values, (rowPtr[n]) * sizeof(double), cudaMemcpyHostToDevice);cudaMemcpy(d_rowPtr, rowPtr, (n + 1) * sizeof(int), cudaMemcpyHostToDevice);cudaMemcpy(d_colInd, colInd, (rowPtr[n]) * sizeof(int), cudaMemcpyHostToDevice);// 初始化残差 r = b - A*xcsrMatVecMult<<<(n + 255) / 256, 256>>>(n, d_values, d_rowPtr, d_colInd, d_x, d_r);vectorSub<<<(n + 255) / 256, 256>>>(n, d_b, d_r, d_r);cudaMemcpy(r, d_r, n * sizeof(double), cudaMemcpyDeviceToHost);// 初始化 r0 = rcudaMemcpy(d_r0, d_r, n * sizeof(double), cudaMemcpyDeviceToDevice);double rho = 1.0, alpha = 1.0, omega = 1.0;double *dot_result;cudaMalloc((void **)&dot_result, sizeof(double));for (int iter = 0; iter < max_iter; iter++) {double rho_old = rho;// rho = dot(r0, r)dotProduct<<<1, 256>>>(n, d_r0, d_r, dot_result);cudaMemcpy(&rho, dot_result, sizeof(double), cudaMemcpyDeviceToHost);if (rho == 0.0) break;if (iter > 0) {double beta = (rho / rho_old) * (alpha / omega);// p = r + beta * (p - omega * v)vectorSub<<<(n + 255) / 256, 256>>>(n, d_p, d_v, d_p);vectorAdd<<<(n + 255) / 256, 256>>>(n, d_r, d_p, d_p);} else {// p = rcudaMemcpy(d_p, d_r, n * sizeof(double), cudaMemcpyDeviceToDevice);}// v = A * pcsrMatVecMult<<<(n + 255) / 256, 256>>>(n, d_values, d_rowPtr, d_colInd, d_p, d_v);// alpha = rho / dot(r0, v)dotProduct<<<1, 256>>>(n, d_r0, d_v, dot_result);cudaMemcpy(&alpha, dot_result, sizeof(double), cudaMemcpyDeviceToHost);alpha = rho / alpha;// s = r - alpha * vvectorSub<<<(n + 255) / 256, 256>>>(n, d_r, d_v, d_s);// t = A * scsrMatVecMult<<<(n + 255) / 256, 256>>>(n, d_values, d_rowPtr, d_colInd, d_s, d_t);// omega = dot(t, s) / dot(t, t)dotProduct<<<1, 256>>>(n, d_t, d_s, dot_result);double numerator, denominator;cudaMemcpy(&numerator, dot_result, sizeof(double), cudaMemcpyDeviceToHost);dotProduct<<<1, 256>>>(n, d_t, d_t, dot_result);cudaMemcpy(&denominator, dot_result, sizeof(double), cudaMemcpyDeviceToHost);omega = numerator / denominator;// x = x + alpha * p + omega * svectorAdd<<<(n + 255) / 256, 256>>>(n, d_x, d_p, d_x);vectorAdd<<<(n + 255) / 256, 256>>>(n, d_x, d_s, d_x);// r = s - omega * tvectorSub<<<(n + 255) / 256, 256>>>(n, d_s, d_t, d_r);// 检查收敛double norm_r;dotProduct<<<1, 256>>>(n, d_r, d_r, dot_result);cudaMemcpy(&norm_r, dot_result, sizeof(double), cudaMemcpyDeviceToHost);norm_r = sqrt(norm_r);if (norm_r < tol) break;}// 拷贝结果回主机cudaMemcpy(x, d_x, n * sizeof(double), cudaMemcpyDeviceToHost);// 释放设备内存cudaFree(d_r);cudaFree(d_r0);cudaFree(d_p);cudaFree(d_v);cudaFree(d_s);cudaFree(d_t);cudaFree(d_x);cudaFree(d_b);cudaFree(d_values);cudaFree(d_rowPtr);cudaFree(d_colInd);cudaFree(dot_result);// 释放主机内存free(r);free(r0);free(p);free(v);free(s);free(t);
}int main() {// 示例矩阵和向量int n = 1000;double *values = (double *)malloc(3 * n * sizeof(double));int *rowPtr = (int *)malloc((n + 1) * sizeof(int));int *colInd = (int *)malloc(3 * n * sizeof(int));double *b = (double *)malloc(n * sizeof(double));double *x = (double *)malloc(n * sizeof(double));// 初始化矩阵和向量for (int i = 0; i < n; i++) {rowPtr[i] = 3 * i;colInd[3 * i] = i;colInd[3 * i + 1] = (i + 1) % n;colInd[3 * i + 2] = (i - 1 + n) % n;values[3 * i] = 4.0;values[3 * i + 1] = -1.0;values[3 * i + 2] = -1.0;b[i] = 1.0;x[i] = 0.0;}rowPtr[n] = 3 * n;// 调用PBiCGSTAB算法PBiCGSTAB(n, values, rowPtr, colInd, b, x, 1e-6, 1000);// 输出结果std::cout << "Solution vector x:" << std::endl;for (int i = 0; i < 10; i++) {std::cout << x[i] << " ";}std::cout << std::endl;// 释放内存free(values);free(rowPtr);free(colInd);free(b);free(x);return 0;
}
4. 代码说明
- CSR格式矩阵向量乘法:
csrMatVecMult
核函数实现了CSR格式的矩阵向量乘法。 - 向量操作:
vectorAdd
、vectorSub
和dotProduct
核函数分别实现了向量加法、减法和点积操作。 - PBiCGSTAB算法:
PBiCGSTAB
函数实现了PBiCGSTAB算法的核心逻辑,包括初始化、迭代求解和收敛判断。
5. 注意事项
- 代码中的矩阵和向量大小是固定的,实际应用中可能需要动态调整。
- 代码中没有实现预处理步骤,实际应用中可能需要根据具体问题选择合适的预处理方法。
- 代码中的CUDA核函数和内存管理可能需要根据具体硬件和问题进行优化。
这个示例代码展示了如何在CUDA中实现PBiCGSTAB算法的基本框架,实际应用中可能需要根据具体问题进行进一步的优化和调整。